Prediction for monomer Prediction for complex About Sample output I (monomer) Sample output II (complex)     Help
 

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1. ConSurf and WCN prediction

     Label: When you click on it, the selected residue will be labeled and users can view the position of the residue in predicted structure.
     ConSurf: The sequence conservation profile.
     rWCN I : The reciprocal WCN profile which ignores the packing contributions of the other subunits of the complex.
     rWCN II: The reciprocal WCN profile which considers the packing contributions of the other subunits of the complex.


2. Display (PS)2 predicted structure by OpenAstexViewer

     Users need to install Java Plug-in for watching the protein strucutre.

     Mouse Controls:
     

     Keyboard Controls:
     


3. Control table

     User can manage the structure viewer by pressing the checkboxs and buttons.


4. ConSurf and rWCN profiles

     The reciprocal weighted contact number (rWCN) and the sequence conservation (ConSurf) profiles. The rWCN profiles are shown in blue
     and red lines and the ConSurf profile is shown in black line. These profiles are normalized to z-sores. The correlation coefficients of
     rWCN and ConSurf are also shown.


 
                  Contact
Huang TT, Hwang JK, Chen CH, Chu CS, Lee CW, Chen CC. (PS)2: protein structure prediction server version 3.0. Nucleic Acids Res. 2015, gkv454.
Last updated Apr 7, 2015 (56547 complex templates)